ABIDE1 preprocessing using DPARSF

Submitted by smaleki on Tue, 05/01/2018 - 11:40

 


Dear  Dr. Chao-Gan Yan

I am trying to follow the specified steps in PCP in order to preprocess ABIDE1 using DPARSF. I have attached an screenshot of the best configuration that I think is true ,however my result does not completely match with released preprocessed data. I also spent some time to find the correct configuration in the web but I couldn’t. I appreciate if you could help me to find the exact DPARSF configuration as you did in PCP project. 

Thanks

S Maleki

 

 

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Forums:

YAN Chao-Gan

Fri, 05/04/2018 - 09:27

Please see here: http://preprocessed-connectomes-project.org/abide/dparsf.html

This one is more depend on the template of "Preprocessing in original space".

 

You can also download ABIDE metrics from here: http://mrirc.psych.ac.cn/DownloadRfMRIMaps

This one is used the V4 template (default parameter).

However, as manually reorient might be slightly difference, results may differ slightly.

samr43176

Thu, 07/14/2022 - 13:24

Hello sir,

The link you provided for downloading ABIDE metrics is showing access denied. I would be highly grateful if you can provide the correct parameters as they have been used in the ABIDE Dparsf pipeline. I am using the below parameters as shown in the screenshot but still the correlation matrix is not matching completely with ABIDE preprocessed data.

 

 

YAN Chao-Gan

Sat, 10/01/2022 - 03:39

Go: http://rfmri.org/DownloadRfMRIMaps

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